Package index

Exposure-response plots

Build exposure-response plots from any model that implements er_predict()

er_plot()

The exposure-response plotting mini-language

er_plot_add_model()

Add a fitted-model curve/ribbon layer

er_plot_add_summary()

Add a summary annotation layer

er_plot_add_quantiles()

Add a quantile-binned response summary layer

er_plot_add_data()

Add a raw-data layer

er_plot_add_groups()

Add a grouped exposure-distribution panel

er_plot_theme()

Adjust theme/labels for an er_plot object

er_plot_build()

Build and render an er_plot object

Plot builder functions

Low level functions to draw specific components of an exposure-response plot

er_style

Builder functions for exposure-response plots

er_style_tag()

Tag a builder with structural/aesthetic metadata

er_style_model_ribbonline() er_style_model_line() er_style_model_spaghetti()

Model curve builders for exposure-response plots

er_style_summary_pvalue() er_style_summary_n() er_style_summary_coefficients() er_style_summary_gof()

Summary annotation builders for exposure-response plots

er_style_quantile_errorbar() er_style_quantile_errorbar_vlines() er_style_quantile_pointrange() er_style_quantile_pointrange_vlines()

Quantile summary builders for exposure-response plots

er_style_data_boxjitter() er_style_data_overlay() er_style_data_hex()

Data layer builders for exposure-response plots

er_style_group_boxplot() er_style_group_histogram() er_style_group_violin() er_style_group_linerange() er_style_group_boxjitter() er_style_group_violinjitter()

Group panel builders for exposure-response plots

VPC plots

Functions to build visual predictive check plots

er_vpc()

The exposure-response VPC mini-language

er_vpc_add_observed()

Add the observed-data layer to an er_vpc VPC

er_vpc_add_simulated()

Add the simulated-data layer to an er_vpc VPC

er_vpc_theme()

Adjust theme/labels for an er_vpc object

er_vpc_build()

Build and render an er_vpc object

VPC plot builder functions

Low level functions to draw specific components of a VPC plot

er_style_vpc_observed_quantile_line() er_style_vpc_observed_quantile_errorbar() er_style_vpc_observed_mean_errorbar()

Observed-layer builders for VPC plots

er_style_vpc_simulated_quantile_ribbon() er_style_vpc_simulated_quantile_errorbar() er_style_vpc_simulated_mean_errorbar()

Simulated-layer builders for VPC plots

Confidence intervals

Helper functions to compute confidence intervals

ci_clopper_pearson()

Clopper-Pearson confidence interval for binary data

ci_poisson()

Exact Poisson confidence interval for a count rate

ci_t()

t-interval confidence interval for the mean of continuous data

ci_quantile()

Distribution-free confidence interval for a sample quantile

Model interface

The generics a model must (or may) implement to work with erplots

er_predict() er_simulate() er_summary()

Model interface for exposure-response plots

Other

Other functions and objects

cut_exposure_quantile() cut_quantile()

Cut a continuous variable into quantiles

erplots_data

Simulated exposure-response data